===================
Morphological tools
===================

There are many existing tools to obtain/analyze neuronal morphologies,
here is a list of several such tools.


General viewers
===============

* HBP tool: `morphology-viewer (open-access)`_ or `on the collab`_
* Neuroptikon_


Morphology analysis
===================

* Torben-Nielsen's btmorph2_ on GitHub_
* L-measure_


Image analysis
==============

* FARSIGHT_
* CVLab_ Fiji plugin
* NeuroProof_


.. References

.. _`on the collab`: https://collab.humanbrainproject.eu/#/collab/47/nav/4835
.. _`morphology-viewer (open-access)`: https://neuroinformatics.nl/HBP/morphology-viewer
.. _btmorph2: http://www.dendrites.zyituubwv.net/btmorph_v2/index.html
.. _GitHub: https://github.com/btorboist/btmorph_v2
.. _L-measure: http://cng.gmu.edu:8080/Lm/
.. _FARSIGHT: http://www.farsight-toolkit.org/wiki/
.. _CVLab: http://cvlab.epfl.ch/cms/site/cvlab2/lang/en/software/delin/index.php
.. _NeuroProof: https://github.com/janelia-flyem/NeuroProof
.. _Neuroptikon: https://github.com/JaneliaSciComp/Neuroptikon/wiki